SHOGoiN Cell Transcriptome: GSM1269104

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269104


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T122Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 86.6396
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 81.1097
3 ENSG00000182718 ANXA2 annexin A2 75.9010
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 66.6800
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 61.0133
6 ENSG00000115414 FN1 fibronectin 1 54.1778
7 ENSG00000137801 THBS1 thrombospondin 1 52.4006
8 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 46.5084
9 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 36.7200
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 36.6585

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285736 Novel transcript -0.0892
58502 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0892
58501 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0892
58500 ENSG00000285733 novel protein -0.0892
58499 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0892
58498 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0892
58497 ENSG00000285730 novel transcript -0.0892
58496 ENSG00000285729 novel transcript -0.0892
58495 ENSG00000285728 novel transcript, antisense to PPIH -0.0892
58494 ENSG00000285727 novel transcript -0.0892

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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