SHOGoiN Cell Transcriptome: GSM1269113

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269113


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T128Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000119718 EIF2B2 eukaryotic translation initiation factor 2B subunit beta 163.9111
2 ENSG00000106591 MRPL32 mitochondrial ribosomal protein L32 115.1784
3 ENSG00000138600 SPPL2A signal peptide peptidase like 2A 69.6604
4 ENSG00000135390 ATP5MC2 ATP synthase membrane subunit c locus 2 57.9199
5 ENSG00000142089 IFITM3 interferon induced transmembrane protein 3 54.1228
6 ENSG00000101608 MYL12A myosin light chain 12A 41.9862
7 ENSG00000258646 novel transcript, antisense to EIF2B2 40.9613
8 ENSG00000112308 C6orf62 chromosome 6 open reading frame 62 34.8114
9 ENSG00000085063 CD59 CD59 molecule (CD59 blood group) 26.4486
10 ENSG00000112081 SRSF3 serine and arginine rich splicing factor 3 23.7231

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285745 general transcription factor IIH subunit 5 (GTF2H5) pseudogene -0.0143
58502 ENSG00000285744 novel transcript -0.0143
58501 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0143
58500 ENSG00000285742 novel transcript -0.0143
58499 ENSG00000285741 novel transcript -0.0143
58498 ENSG00000285740 novel transcript -0.0143
58497 ENSG00000285739 novel transcript, antisense to NRG3 -0.0143
58496 ENSG00000285738 Novel transcript -0.0143
58495 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0143
58494 ENSG00000285736 Novel transcript -0.0143

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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