Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269120

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269120


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T135Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 115.4028
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 80.1020
3 ENSG00000182718 ANXA2 annexin A2 78.8054
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 67.9504
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 65.5356
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 47.4896
7 ENSG00000115414 FN1 fibronectin 1 42.2614
8 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 39.1685
9 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 33.1373
10 ENSG00000187109 NAP1L1 nucleosome assembly protein 1 like 1 26.3865

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285745 general transcription factor IIH subunit 5 (GTF2H5) pseudogene -0.0817
58502 ENSG00000285744 novel transcript -0.0817
58501 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0817
58500 ENSG00000285742 novel transcript -0.0817
58499 ENSG00000285741 novel transcript -0.0817
58498 ENSG00000285740 novel transcript -0.0817
58497 ENSG00000285739 novel transcript, antisense to NRG3 -0.0817
58496 ENSG00000285738 Novel transcript -0.0817
58495 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0817
58494 ENSG00000285736 Novel transcript -0.0817

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...