SHOGoiN Cell Transcriptome: GSM1269121

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269121


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T136Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000135047 CTSL cathepsin L 151.2529
2 ENSG00000269743 SLC25A53 solute carrier family 25 member 53 75.4215
3 ENSG00000082212 ME2 malic enzyme 2 73.0706
4 ENSG00000116704 SLC35D1 solute carrier family 35 member D1 70.2924
5 ENSG00000133961 NUMB NUMB endocytic adaptor protein 67.8347
6 ENSG00000221923 ZNF880 zinc finger protein 880 61.3878
7 ENSG00000176986 SEC24C SEC24 homolog C, COPII coat complex component 58.8233
8 ENSG00000025800 KPNA6 karyopherin subunit alpha 6 46.1788
9 ENSG00000124193 SRSF6 serine and arginine rich splicing factor 6 39.0195
10 ENSG00000112343 TRIM38 tripartite motif containing 38 38.0222

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285746 putative UPF0607 protein ENSP00000383144 -0.0182
58502 ENSG00000285745 general transcription factor IIH subunit 5 (GTF2H5) pseudogene -0.0182
58501 ENSG00000285744 novel transcript -0.0182
58500 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0182
58499 ENSG00000285742 novel transcript -0.0182
58498 ENSG00000285741 novel transcript -0.0182
58497 ENSG00000285740 novel transcript -0.0182
58496 ENSG00000285739 novel transcript, antisense to NRG3 -0.0182
58495 ENSG00000285738 Novel transcript -0.0182
58494 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0182

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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