SHOGoiN Cell Transcriptome: GSM1269122
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1269122 Profile download | 6000003010000000000000-738 | Sequence Read Archive | SRP033135 | SRP033135_T137 | Pseudo-temporal ordering of individual cells reveals regulators of differentiation | Transcriptome | Myoblast_T24 (Skeletal muscle) | Human | Muscle | RNA-seq | HiSeq 2500 | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSG00000198804 | MT-CO1 | mitochondrially encoded cytochrome c oxidase I | 105.7583 |
| 2 | ENSG00000210082 | MT-RNR2 | mitochondrially encoded 16S rRNA | 76.3977 |
| 3 | ENSG00000251562 | MALAT1 | metastasis associated lung adenocarcinoma transcript 1 | 57.6119 |
| 4 | ENSG00000156508 | EEF1A1 | eukaryotic translation elongation factor 1 alpha 1 | 56.9087 |
| 5 | ENSG00000113140 | SPARC | secreted protein acidic and cysteine rich | 41.8667 |
| 6 | ENSG00000198886 | MT-ND4 | mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 | 34.1515 |
| 7 | ENSG00000159251 | ACTC1 | actin alpha cardiac muscle 1 | 30.4948 |
| 8 | ENSG00000198712 | MT-CO2 | mitochondrially encoded cytochrome c oxidase II | 27.1797 |
| 9 | ENSG00000111640 | GAPDH | glyceraldehyde-3-phosphate dehydrogenase | 26.9654 |
| 10 | ENSG00000112081 | SRSF3 | serine and arginine rich splicing factor 3 | 24.6348 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 58503 | ENSG00000285744 | novel transcript | -0.1048 | |
| 58502 | ENSG00000285743 | novel transcript, LINP1-LINC00707 readthrough | -0.1048 | |
| 58501 | ENSG00000285742 | novel transcript | -0.1048 | |
| 58500 | ENSG00000285741 | novel transcript | -0.1048 | |
| 58499 | ENSG00000285740 | novel transcript | -0.1048 | |
| 58498 | ENSG00000285739 | novel transcript, antisense to NRG3 | -0.1048 | |
| 58497 | ENSG00000285738 | Novel transcript | -0.1048 | |
| 58496 | ENSG00000285737 | LINC02680 | long intergenic non-protein coding RNA 2680 | -0.1048 |
| 58495 | ENSG00000285736 | Novel transcript | -0.1048 | |
| 58494 | ENSG00000285735 | LINC02717 | long intergenic non-protein coding RNA 2717 | -0.1048 |
