Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269122

Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1269122 Profile download	6000003010000000000000-738	Sequence Read Archive	SRP033135	SRP033135_T137	Pseudo-temporal ordering of individual cells reveals regulators of differentiation	Transcriptome	Myoblast_T24 (Skeletal muscle)	Human	Muscle	RNA-seq	HiSeq 2500	Sequence

Histogram (Expression count)

Top 10 up-regulated genes

Rank	ENSG	Gene symbol	Description	Z-score
1	ENSG00000198804	MT-CO1	mitochondrially encoded cytochrome c oxidase I	105.7583
2	ENSG00000210082	MT-RNR2	mitochondrially encoded 16S rRNA	76.3977
3	ENSG00000251562	MALAT1	metastasis associated lung adenocarcinoma transcript 1	57.6119
4	ENSG00000156508	EEF1A1	eukaryotic translation elongation factor 1 alpha 1	56.9087
5	ENSG00000113140	SPARC	secreted protein acidic and cysteine rich	41.8667
6	ENSG00000198886	MT-ND4	mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4	34.1515
7	ENSG00000159251	ACTC1	actin alpha cardiac muscle 1	30.4948
8	ENSG00000198712	MT-CO2	mitochondrially encoded cytochrome c oxidase II	27.1797
9	ENSG00000111640	GAPDH	glyceraldehyde-3-phosphate dehydrogenase	26.9654
10	ENSG00000112081	SRSF3	serine and arginine rich splicing factor 3	24.6348

Bottom 10 down-regulated genes

Rank	ENSG	Gene symbol	Description	Z-score
58503	ENSG00000285744		novel transcript	-0.1048
58502	ENSG00000285743		novel transcript, LINP1-LINC00707 readthrough	-0.1048
58501	ENSG00000285742		novel transcript	-0.1048
58500	ENSG00000285741		novel transcript	-0.1048
58499	ENSG00000285740		novel transcript	-0.1048
58498	ENSG00000285739		novel transcript, antisense to NRG3	-0.1048
58497	ENSG00000285738		Novel transcript	-0.1048
58496	ENSG00000285737	LINC02680	long intergenic non-protein coding RNA 2680	-0.1048
58495	ENSG00000285736		Novel transcript	-0.1048
58494	ENSG00000285735	LINC02717	long intergenic non-protein coding RNA 2717	-0.1048

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	Z-score

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