Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269124

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269124


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T139Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T24 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 76.2432
2 ENSG00000115414 FN1 fibronectin 1 74.9532
3 ENSG00000182718 ANXA2 annexin A2 66.9944
4 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 59.3034
5 ENSG00000075624 ACTB actin beta 55.9324
6 ENSG00000167601 AXL AXL receptor tyrosine kinase 51.4663
7 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 44.8096
8 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 39.9905
9 ENSG00000184009 ACTG1 actin gamma 1 39.7471
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 35.0619

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.1076
58502 ENSG00000285742 novel transcript -0.1076
58501 ENSG00000285741 novel transcript -0.1076
58500 ENSG00000285740 novel transcript -0.1076
58499 ENSG00000285739 novel transcript, antisense to NRG3 -0.1076
58498 ENSG00000285738 Novel transcript -0.1076
58497 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.1076
58496 ENSG00000285736 Novel transcript -0.1076
58495 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1076
58494 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1076

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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