Human Omics database for
the Generation of iPS and Normal Cells
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All Modules
Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1269142
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1269142
Profile download
6000003010000000000000-738
Sequence Read Archive
SRP033135
SRP033135_T155
Pseudo-temporal ordering of individual cells reveals regulators of differentiation
Transcriptome
Myoblast_T24 (Skeletal muscle)
Human
Muscle
RNA-seq
HiSeq 2500
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000198804
MT-CO1
mitochondrially encoded cytochrome c oxidase I
109.9774
2
ENSG00000210082
MT-RNR2
mitochondrially encoded 16S rRNA
68.4952
3
ENSG00000156508
EEF1A1
eukaryotic translation elongation factor 1 alpha 1
60.4852
4
ENSG00000184009
ACTG1
actin gamma 1
52.2775
5
ENSG00000251562
MALAT1
metastasis associated lung adenocarcinoma transcript 1
51.7144
6
ENSG00000075624
ACTB
actin beta
43.0854
7
ENSG00000182718
ANXA2
annexin A2
40.2513
8
ENSG00000079332
SAR1A
secretion associated Ras related GTPase 1A
35.4072
9
ENSG00000167601
AXL
AXL receptor tyrosine kinase
34.2326
10
ENSG00000115414
FN1
fibronectin 1
29.4146
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285741
novel transcript
-0.1010
58502
ENSG00000285740
novel transcript
-0.1010
58501
ENSG00000285739
novel transcript, antisense to NRG3
-0.1010
58500
ENSG00000285738
Novel transcript
-0.1010
58499
ENSG00000285737
LINC02680
long intergenic non-protein coding RNA 2680
-0.1010
58498
ENSG00000285736
Novel transcript
-0.1010
58497
ENSG00000285735
LINC02717
long intergenic non-protein coding RNA 2717
-0.1010
58496
ENSG00000285734
novel transcript, antisense to CACNA1C
-0.1010
58495
ENSG00000285733
novel protein
-0.1010
58494
ENSG00000285732
novel transcript, antisense to ABCD2
-0.1010
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
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