Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269155

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269155


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T163Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 121.7765
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 79.3824
3 ENSG00000115414 FN1 fibronectin 1 68.1022
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 63.2688
5 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 56.0188
6 ENSG00000182718 ANXA2 annexin A2 48.0008
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 39.4825
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 33.7543
9 ENSG00000091986 CCDC80 coiled-coil domain containing 80 28.4982
10 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 27.8571

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285742 novel transcript -0.0863
58502 ENSG00000285741 novel transcript -0.0863
58501 ENSG00000285740 novel transcript -0.0863
58500 ENSG00000285739 novel transcript, antisense to NRG3 -0.0863
58499 ENSG00000285738 Novel transcript -0.0863
58498 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0863
58497 ENSG00000285736 Novel transcript -0.0863
58496 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0863
58495 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0863
58494 ENSG00000285733 novel protein -0.0863

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...