Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269165

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269165


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T173Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 95.3260
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 91.2659
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 79.1665
4 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 66.3399
5 ENSG00000087086 FTL ferritin light chain 48.2109
6 ENSG00000182718 ANXA2 annexin A2 40.7876
7 ENSG00000100316 RPL3 ribosomal protein L3 35.7479
8 ENSG00000134294 SLC38A2 solute carrier family 38 member 2 31.9302
9 ENSG00000115414 FN1 fibronectin 1 29.7588
10 ENSG00000177565 TBL1XR1 transducin beta like 1 X-linked receptor 1 29.3649

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285739 novel transcript, antisense to NRG3 -0.0959
58502 ENSG00000285738 Novel transcript -0.0959
58501 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0959
58500 ENSG00000285736 Novel transcript -0.0959
58499 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0959
58498 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0959
58497 ENSG00000285733 novel protein -0.0959
58496 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0959
58495 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0959
58494 ENSG00000285730 novel transcript -0.0959

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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