Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269174

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269174


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T180Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 76.9194
2 ENSG00000115414 FN1 fibronectin 1 64.1289
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 59.9178
4 ENSG00000075624 ACTB actin beta 57.0084
5 ENSG00000182718 ANXA2 annexin A2 54.2214
6 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 50.3336
7 ENSG00000107796 ACTA2 actin alpha 2, smooth muscle 48.4639
8 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 45.5808
9 ENSG00000184009 ACTG1 actin gamma 1 42.4006
10 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 36.1539

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1036
58502 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1036
58501 ENSG00000285733 novel protein -0.1036
58500 ENSG00000285732 novel transcript, antisense to ABCD2 -0.1036
58499 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.1036
58498 ENSG00000285730 novel transcript -0.1036
58497 ENSG00000285729 novel transcript -0.1036
58496 ENSG00000285728 novel transcript, antisense to PPIH -0.1036
58495 ENSG00000285727 novel transcript -0.1036
58494 ENSG00000285726 novel transcript -0.1036

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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