Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269175

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269175


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T181Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 123.7960
2 ENSG00000137801 THBS1 thrombospondin 1 98.6252
3 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 67.2074
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 59.3399
5 ENSG00000115414 FN1 fibronectin 1 48.4796
6 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 43.2455
7 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 40.6643
8 ENSG00000087086 FTL ferritin light chain 36.2862
9 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 35.5413
10 ENSG00000088448 ANKRD10 ankyrin repeat domain 10 25.6612

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285739 novel transcript, antisense to NRG3 -0.0847
58502 ENSG00000285738 Novel transcript -0.0847
58501 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0847
58500 ENSG00000285736 Novel transcript -0.0847
58499 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0847
58498 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0847
58497 ENSG00000285733 novel protein -0.0847
58496 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0847
58495 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0847
58494 ENSG00000285730 novel transcript -0.0847

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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