Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269177

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269177


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T183Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 142.6623
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 93.1478
3 ENSG00000155657 TTN titin 73.7220
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 66.4604
5 ENSG00000167552 TUBA1A tubulin alpha 1a 48.0285
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 36.0511
7 ENSG00000109063 MYH3 myosin heavy chain 3 34.9419
8 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 32.7789
9 ENSG00000159173 TNNI1 troponin I1, slow skeletal type 29.5736
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 27.9363

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285745 general transcription factor IIH subunit 5 (GTF2H5) pseudogene -0.0563
58502 ENSG00000285744 novel transcript -0.0563
58501 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0563
58500 ENSG00000285742 novel transcript -0.0563
58499 ENSG00000285741 novel transcript -0.0563
58498 ENSG00000285740 novel transcript -0.0563
58497 ENSG00000285739 novel transcript, antisense to NRG3 -0.0563
58496 ENSG00000285738 Novel transcript -0.0563
58495 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0563
58494 ENSG00000285736 Novel transcript -0.0563

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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