Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269179

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269179


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T185Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 188.9275
2 ENSG00000167552 TUBA1A tubulin alpha 1a 72.1304
3 ENSG00000155657 TTN titin 47.3672
4 ENSG00000159173 TNNI1 troponin I1, slow skeletal type 29.6993
5 ENSG00000143632 ACTA1 actin alpha 1, skeletal muscle 28.2576
6 ENSG00000075624 ACTB actin beta 24.7222
7 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 22.2428
8 ENSG00000133055 MYBPH myosin binding protein H 19.5737
9 ENSG00000103994 ZNF106 zinc finger protein 106 18.9554
10 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 18.6799

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285738 Novel transcript -0.0685
58502 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0685
58501 ENSG00000285736 Novel transcript -0.0685
58500 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0685
58499 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0685
58498 ENSG00000285733 novel protein -0.0685
58497 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0685
58496 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0685
58495 ENSG00000285729 novel transcript -0.0685
58494 ENSG00000285728 novel transcript, antisense to PPIH -0.0685

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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