Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269180

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269180


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T186Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 95.9032
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 78.1676
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 66.0278
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 53.2214
5 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 50.7991
6 ENSG00000182718 ANXA2 annexin A2 46.6680
7 ENSG00000184009 ACTG1 actin gamma 1 41.1192
8 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 39.7578
9 ENSG00000075624 ACTB actin beta 39.2696
10 ENSG00000167552 TUBA1A tubulin alpha 1a 36.3027

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285739 novel transcript, antisense to NRG3 -0.1074
58502 ENSG00000285738 Novel transcript -0.1074
58501 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.1074
58500 ENSG00000285736 Novel transcript -0.1074
58499 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1074
58498 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1074
58497 ENSG00000285733 novel protein -0.1074
58496 ENSG00000285732 novel transcript, antisense to ABCD2 -0.1074
58495 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.1074
58494 ENSG00000285730 novel transcript -0.1074

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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