SHOGoiN Cell Transcriptome: GSM1269182

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269182


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T188Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 82.3157
2 ENSG00000107796 ACTA2 actin alpha 2, smooth muscle 75.2603
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 65.8444
4 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 59.7802
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 58.4630
6 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 52.4900
7 ENSG00000180139 ACTA2-AS1 ACTA2 antisense RNA 1 45.5129
8 ENSG00000075624 ACTB actin beta 43.6610
9 ENSG00000167601 AXL AXL receptor tyrosine kinase 35.1450
10 ENSG00000182718 ANXA2 annexin A2 33.2670

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285742 novel transcript -0.1059
58502 ENSG00000285741 novel transcript -0.1059
58501 ENSG00000285740 novel transcript -0.1059
58500 ENSG00000285739 novel transcript, antisense to NRG3 -0.1059
58499 ENSG00000285738 Novel transcript -0.1059
58498 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.1059
58497 ENSG00000285736 Novel transcript -0.1059
58496 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1059
58495 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1059
58494 ENSG00000285733 novel protein -0.1059

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...