Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269183

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269183


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T189Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 114.7691
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 105.8994
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 66.3798
4 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 49.6305
5 ENSG00000115414 FN1 fibronectin 1 46.6402
6 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 43.2459
7 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 40.3163
8 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 35.5683
9 ENSG00000088448 ANKRD10 ankyrin repeat domain 10 34.3156
10 ENSG00000137801 THBS1 thrombospondin 1 32.2548

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285733 novel protein -0.0923
58502 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0923
58501 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0923
58500 ENSG00000285729 novel transcript -0.0923
58499 ENSG00000285728 novel transcript, antisense to PPIH -0.0923
58498 ENSG00000285727 novel transcript -0.0923
58497 ENSG00000285726 novel transcript -0.0923
58496 ENSG00000285725 novel transcript -0.0923
58495 ENSG00000285724 novel transcript -0.0923
58494 ENSG00000285723 novel protein -0.0923

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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