SHOGoiN Cell Transcriptome: GSM1269184

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269184


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T190Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 94.7475
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 79.0244
3 ENSG00000182718 ANXA2 annexin A2 59.4776
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 56.3082
5 ENSG00000167601 AXL AXL receptor tyrosine kinase 55.1126
6 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 50.3077
7 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 40.4723
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 34.6522
9 ENSG00000075624 ACTB actin beta 33.1070
10 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 31.4941

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285733 novel protein -0.1101
58502 ENSG00000285732 novel transcript, antisense to ABCD2 -0.1101
58501 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.1101
58500 ENSG00000285729 novel transcript -0.1101
58499 ENSG00000285728 novel transcript, antisense to PPIH -0.1101
58498 ENSG00000285727 novel transcript -0.1101
58497 ENSG00000285726 novel transcript -0.1101
58496 ENSG00000285725 novel transcript -0.1101
58495 ENSG00000285724 novel transcript -0.1101
58494 ENSG00000285723 novel protein -0.1101

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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