SHOGoiN Cell Transcriptome: GSM1269185

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269185


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T191Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 87.7922
2 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 87.4169
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 70.4958
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 65.2406
5 ENSG00000167552 TUBA1A tubulin alpha 1a 47.7307
6 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 47.6498
7 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 45.3828
8 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 34.0776
9 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 33.6801
10 ENSG00000184009 ACTG1 actin gamma 1 30.9201

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285744 novel transcript -0.1031
58502 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.1031
58501 ENSG00000285742 novel transcript -0.1031
58500 ENSG00000285741 novel transcript -0.1031
58499 ENSG00000285740 novel transcript -0.1031
58498 ENSG00000285739 novel transcript, antisense to NRG3 -0.1031
58497 ENSG00000285738 Novel transcript -0.1031
58496 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.1031
58495 ENSG00000285736 Novel transcript -0.1031
58494 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1031

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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