Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269192

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269192


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T197Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198791 CNOT7 CCR4-NOT transcription complex subunit 7 158.8047
2 ENSG00000155657 TTN titin 101.4494
3 ENSG00000196628 TCF4 transcription factor 4 45.4693
4 ENSG00000183091 NEB nebulin 44.4446
5 ENSG00000166963 MAP1A microtubule associated protein 1A 43.8244
6 ENSG00000269968 novel transcript, antisense to GAPDH 41.2267
7 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 39.7167
8 ENSG00000127603 MACF1 microtubule actin crosslinking factor 1 37.4336
9 ENSG00000145391 SETD7 SET domain containing 7, histone lysine methyltransferase 32.4810
10 ENSG00000092054 MYH7 myosin heavy chain 7 30.2249

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285745 general transcription factor IIH subunit 5 (GTF2H5) pseudogene -0.0303
58502 ENSG00000285744 novel transcript -0.0303
58501 ENSG00000285742 novel transcript -0.0303
58500 ENSG00000285741 novel transcript -0.0303
58499 ENSG00000285740 novel transcript -0.0303
58498 ENSG00000285739 novel transcript, antisense to NRG3 -0.0303
58497 ENSG00000285738 Novel transcript -0.0303
58496 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0303
58495 ENSG00000285736 Novel transcript -0.0303
58494 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0303

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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