SHOGoiN Cell Transcriptome: GSM1269196

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269196


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T201Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 91.1433
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 88.6074
3 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 67.5238
4 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 64.7993
5 ENSG00000087086 FTL ferritin light chain 48.5570
6 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 46.3704
7 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 36.8556
8 ENSG00000091986 CCDC80 coiled-coil domain containing 80 36.6111
9 ENSG00000167601 AXL AXL receptor tyrosine kinase 29.3737
10 ENSG00000100316 RPL3 ribosomal protein L3 25.4266

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285741 novel transcript -0.0930
58502 ENSG00000285740 novel transcript -0.0930
58501 ENSG00000285739 novel transcript, antisense to NRG3 -0.0930
58500 ENSG00000285738 Novel transcript -0.0930
58499 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0930
58498 ENSG00000285736 Novel transcript -0.0930
58497 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0930
58496 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0930
58495 ENSG00000285733 novel protein -0.0930
58494 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0930

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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