SHOGoiN Cell Transcriptome: GSM1269197
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1269197 Profile download | 6000003010000000000000-738 | Sequence Read Archive | SRP033135 | SRP033135_T202 | Pseudo-temporal ordering of individual cells reveals regulators of differentiation | Transcriptome | Myoblast_T48 (Skeletal muscle) | Human | Muscle | RNA-seq | HiSeq 2500 | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSG00000251562 | MALAT1 | metastasis associated lung adenocarcinoma transcript 1 | 182.0005 |
| 2 | ENSG00000137801 | THBS1 | thrombospondin 1 | 77.0331 |
| 3 | ENSG00000210082 | MT-RNR2 | mitochondrially encoded 16S rRNA | 75.2062 |
| 4 | ENSG00000108821 | COL1A1 | collagen type I alpha 1 chain | 27.3316 |
| 5 | ENSG00000088448 | ANKRD10 | ankyrin repeat domain 10 | 22.8853 |
| 6 | ENSG00000245532 | NEAT1 | nuclear paraspeckle assembly transcript 1 | 22.4271 |
| 7 | ENSG00000115414 | FN1 | fibronectin 1 | 22.2456 |
| 8 | ENSG00000164692 | COL1A2 | collagen type I alpha 2 chain | 19.9173 |
| 9 | ENSG00000198804 | MT-CO1 | mitochondrially encoded cytochrome c oxidase I | 19.4908 |
| 10 | ENSG00000166710 | B2M | beta-2-microglobulin | 18.9145 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 58503 | ENSG00000285741 | novel transcript | -0.0665 | |
| 58502 | ENSG00000285740 | novel transcript | -0.0665 | |
| 58501 | ENSG00000285739 | novel transcript, antisense to NRG3 | -0.0665 | |
| 58500 | ENSG00000285738 | Novel transcript | -0.0665 | |
| 58499 | ENSG00000285737 | LINC02680 | long intergenic non-protein coding RNA 2680 | -0.0665 |
| 58498 | ENSG00000285736 | Novel transcript | -0.0665 | |
| 58497 | ENSG00000285735 | LINC02717 | long intergenic non-protein coding RNA 2717 | -0.0665 |
| 58496 | ENSG00000285734 | novel transcript, antisense to CACNA1C | -0.0665 | |
| 58495 | ENSG00000285733 | novel protein | -0.0665 | |
| 58494 | ENSG00000285732 | novel transcript, antisense to ABCD2 | -0.0665 |
