Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269197

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269197


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T202Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 182.0005
2 ENSG00000137801 THBS1 thrombospondin 1 77.0331
3 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 75.2062
4 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 27.3316
5 ENSG00000088448 ANKRD10 ankyrin repeat domain 10 22.8853
6 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 22.4271
7 ENSG00000115414 FN1 fibronectin 1 22.2456
8 ENSG00000164692 COL1A2 collagen type I alpha 2 chain 19.9173
9 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 19.4908
10 ENSG00000166710 B2M beta-2-microglobulin 18.9145

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285741 novel transcript -0.0665
58502 ENSG00000285740 novel transcript -0.0665
58501 ENSG00000285739 novel transcript, antisense to NRG3 -0.0665
58500 ENSG00000285738 Novel transcript -0.0665
58499 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0665
58498 ENSG00000285736 Novel transcript -0.0665
58497 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0665
58496 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0665
58495 ENSG00000285733 novel protein -0.0665
58494 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0665

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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