Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269199

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269199


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T204Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 155.8143
2 ENSG00000155657 TTN titin 75.0757
3 ENSG00000167552 TUBA1A tubulin alpha 1a 58.8058
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 57.2895
5 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 50.5754
6 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 47.1665
7 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 35.7454
8 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 23.8225
9 ENSG00000176887 SOX11 SRY-box transcription factor 11 23.3698
10 ENSG00000127603 MACF1 microtubule actin crosslinking factor 1 21.6408

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285740 novel transcript -0.0778
58502 ENSG00000285739 novel transcript, antisense to NRG3 -0.0778
58501 ENSG00000285738 Novel transcript -0.0778
58500 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0778
58499 ENSG00000285736 Novel transcript -0.0778
58498 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0778
58497 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0778
58496 ENSG00000285733 novel protein -0.0778
58495 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0778
58494 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0778

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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