SHOGoiN Cell Transcriptome: GSM1269208

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269208


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T213Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 148.7538
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 108.8627
3 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 83.8663
4 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 69.4077
5 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 60.7802
6 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 41.9196
7 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 40.9645
8 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 38.8085
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 36.8324
10 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 22.8444

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285742 novel transcript -0.0236
58502 ENSG00000285741 novel transcript -0.0236
58501 ENSG00000285740 novel transcript -0.0236
58500 ENSG00000285739 novel transcript, antisense to NRG3 -0.0236
58499 ENSG00000285738 Novel transcript -0.0236
58498 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0236
58497 ENSG00000285736 Novel transcript -0.0236
58496 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0236
58495 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0236
58494 ENSG00000285733 novel protein -0.0236

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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