Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269214

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269214


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T219Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 132.1145
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 131.4491
3 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 53.5434
4 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 50.6653
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 42.1588
6 ENSG00000107796 ACTA2 actin alpha 2, smooth muscle 41.8933
7 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 39.6511
8 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 36.6353
9 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 34.1079
10 ENSG00000100234 TIMP3 TIMP metallopeptidase inhibitor 3 31.4363

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285739 novel transcript, antisense to NRG3 -0.0524
58502 ENSG00000285738 Novel transcript -0.0524
58501 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0524
58500 ENSG00000285736 Novel transcript -0.0524
58499 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0524
58498 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0524
58497 ENSG00000285733 novel protein -0.0524
58496 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0524
58495 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0524
58494 ENSG00000285730 novel transcript -0.0524

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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