SHOGoiN Cell Transcriptome: GSM1269221

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269221


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T223Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 82.3496
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 76.0668
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 73.4239
4 ENSG00000075624 ACTB actin beta 71.3357
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 69.5955
6 ENSG00000137801 THBS1 thrombospondin 1 58.4112
7 ENSG00000115414 FN1 fibronectin 1 45.4903
8 ENSG00000107796 ACTA2 actin alpha 2, smooth muscle 39.0589
9 ENSG00000182718 ANXA2 annexin A2 37.3296
10 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 31.6595

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285744 novel transcript -0.0808
58502 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0808
58501 ENSG00000285742 novel transcript -0.0808
58500 ENSG00000285741 novel transcript -0.0808
58499 ENSG00000285740 novel transcript -0.0808
58498 ENSG00000285739 novel transcript, antisense to NRG3 -0.0808
58497 ENSG00000285738 Novel transcript -0.0808
58496 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0808
58495 ENSG00000285736 Novel transcript -0.0808
58494 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0808

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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