Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269223

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269223


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T225Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 154.4750
2 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 89.9154
3 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 74.6793
4 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 68.2863
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 67.7132
6 ENSG00000167552 TUBA1A tubulin alpha 1a 39.2187
7 ENSG00000126947 ARMCX1 armadillo repeat containing X-linked 1 36.7119
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 31.2134
9 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 29.0278
10 ENSG00000198162 MAN1A2 mannosidase alpha class 1A member 2 28.0830

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285745 general transcription factor IIH subunit 5 (GTF2H5) pseudogene -0.0272
58502 ENSG00000285744 novel transcript -0.0272
58501 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0272
58500 ENSG00000285742 novel transcript -0.0272
58499 ENSG00000285741 novel transcript -0.0272
58498 ENSG00000285740 novel transcript -0.0272
58497 ENSG00000285739 novel transcript, antisense to NRG3 -0.0272
58496 ENSG00000285738 Novel transcript -0.0272
58495 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0272
58494 ENSG00000285736 Novel transcript -0.0272

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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