Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269233

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269233


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T232Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 169.6928
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 45.1487
3 ENSG00000075624 ACTB actin beta 44.9010
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 43.1585
5 ENSG00000167552 TUBA1A tubulin alpha 1a 33.6231
6 ENSG00000107796 ACTA2 actin alpha 2, smooth muscle 29.3772
7 ENSG00000155657 TTN titin 27.3163
8 ENSG00000123416 TUBA1B tubulin alpha 1b 26.8651
9 ENSG00000258017 novel transcript, antisense to TUBA1B 24.9280
10 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 24.5476

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0870
58502 ENSG00000285736 Novel transcript -0.0870
58501 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0870
58500 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0870
58499 ENSG00000285733 novel protein -0.0870
58498 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0870
58497 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0870
58496 ENSG00000285730 novel transcript -0.0870
58495 ENSG00000285729 novel transcript -0.0870
58494 ENSG00000285728 novel transcript, antisense to PPIH -0.0870

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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