Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269234

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269234


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T233Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 97.7376
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 84.9553
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 64.0426
4 ENSG00000137801 THBS1 thrombospondin 1 42.6941
5 ENSG00000182718 ANXA2 annexin A2 39.8191
6 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 39.6515
7 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 38.7798
8 ENSG00000100316 RPL3 ribosomal protein L3 34.9325
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 34.0860
10 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 33.5998

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285738 Novel transcript -0.1119
58502 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.1119
58501 ENSG00000285736 Novel transcript -0.1119
58500 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1119
58499 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1119
58498 ENSG00000285733 novel protein -0.1119
58497 ENSG00000285732 novel transcript, antisense to ABCD2 -0.1119
58496 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.1119
58495 ENSG00000285730 novel transcript -0.1119
58494 ENSG00000285729 novel transcript -0.1119

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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