SHOGoiN Cell Transcriptome: GSM1269239

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269239


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T237Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 180.4019
2 ENSG00000167552 TUBA1A tubulin alpha 1a 83.1993
3 ENSG00000159173 TNNI1 troponin I1, slow skeletal type 31.2093
4 ENSG00000124491 F13A1 coagulation factor XIII A chain 25.5408
5 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 24.5793
6 ENSG00000155657 TTN titin 23.8188
7 ENSG00000091527 CDV3 CDV3 homolog 22.6864
8 ENSG00000196230 TUBB tubulin beta class I 20.7684
9 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 20.3044
10 ENSG00000103994 ZNF106 zinc finger protein 106 18.3781

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285744 novel transcript -0.0648
58502 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0648
58501 ENSG00000285742 novel transcript -0.0648
58500 ENSG00000285741 novel transcript -0.0648
58499 ENSG00000285740 novel transcript -0.0648
58498 ENSG00000285739 novel transcript, antisense to NRG3 -0.0648
58497 ENSG00000285738 Novel transcript -0.0648
58496 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0648
58495 ENSG00000285736 Novel transcript -0.0648
58494 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0648

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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