SHOGoiN Cell Transcriptome: GSM1269240

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269240


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T238Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 90.0498
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 81.5854
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 63.9688
4 ENSG00000115414 FN1 fibronectin 1 62.7305
5 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 62.4168
6 ENSG00000182718 ANXA2 annexin A2 57.8269
7 ENSG00000137801 THBS1 thrombospondin 1 46.1651
8 ENSG00000167601 AXL AXL receptor tyrosine kinase 35.8516
9 ENSG00000087086 FTL ferritin light chain 29.0933
10 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 29.0438

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285744 novel transcript -0.0971
58502 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0971
58501 ENSG00000285742 novel transcript -0.0971
58500 ENSG00000285741 novel transcript -0.0971
58499 ENSG00000285740 novel transcript -0.0971
58498 ENSG00000285739 novel transcript, antisense to NRG3 -0.0971
58497 ENSG00000285738 Novel transcript -0.0971
58496 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0971
58495 ENSG00000285736 Novel transcript -0.0971
58494 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0971

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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