SHOGoiN Cell Transcriptome: GSM1269242

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269242


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T240Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 116.5416
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 94.5647
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 68.7099
4 ENSG00000245532 NEAT1 nuclear paraspeckle assembly transcript 1 60.4107
5 ENSG00000088448 ANKRD10 ankyrin repeat domain 10 53.1180
6 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 45.9302
7 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 41.4719
8 ENSG00000124193 SRSF6 serine and arginine rich splicing factor 6 38.3658
9 ENSG00000166710 B2M beta-2-microglobulin 24.4535
10 ENSG00000213639 PPP1CB protein phosphatase 1 catalytic subunit beta 20.2607

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285739 novel transcript, antisense to NRG3 -0.0984
58502 ENSG00000285738 Novel transcript -0.0984
58501 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0984
58500 ENSG00000285736 Novel transcript -0.0984
58499 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0984
58498 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0984
58497 ENSG00000285733 novel protein -0.0984
58496 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0984
58495 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0984
58494 ENSG00000285730 novel transcript -0.0984

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...