SHOGoiN Cell Transcriptome: GSM1269244
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1269244 Profile download | 6000003010000000000000-738 | Sequence Read Archive | SRP033135 | SRP033135_T242 | Pseudo-temporal ordering of individual cells reveals regulators of differentiation | Transcriptome | Myoblast_T48 (Skeletal muscle) | Human | Muscle | RNA-seq | HiSeq 2500 | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSG00000148516 | ZEB1 | zinc finger E-box binding homeobox 1 | 166.1299 |
| 2 | ENSG00000198899 | MT-ATP6 | mitochondrially encoded ATP synthase membrane subunit 6 | 91.0689 |
| 3 | ENSG00000251562 | MALAT1 | metastasis associated lung adenocarcinoma transcript 1 | 78.3282 |
| 4 | ENSG00000210082 | MT-RNR2 | mitochondrially encoded 16S rRNA | 63.3799 |
| 5 | ENSG00000135720 | DYNC1LI2 | dynein cytoplasmic 1 light intermediate chain 2 | 51.9159 |
| 6 | ENSG00000168556 | ING2 | inhibitor of growth family member 2 | 40.6381 |
| 7 | ENSG00000198712 | MT-CO2 | mitochondrially encoded cytochrome c oxidase II | 36.5154 |
| 8 | ENSG00000211459 | MT-RNR1 | mitochondrially encoded 12S rRNA | 26.7537 |
| 9 | ENSG00000157399 | ARSL | arylsulfatase L | 25.7696 |
| 10 | ENSG00000215114 | UBXN2B | UBX domain protein 2B | 24.2535 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 58503 | ENSG00000285744 | novel transcript | -0.0310 | |
| 58502 | ENSG00000285743 | novel transcript, LINP1-LINC00707 readthrough | -0.0310 | |
| 58501 | ENSG00000285742 | novel transcript | -0.0310 | |
| 58500 | ENSG00000285741 | novel transcript | -0.0310 | |
| 58499 | ENSG00000285740 | novel transcript | -0.0310 | |
| 58498 | ENSG00000285739 | novel transcript, antisense to NRG3 | -0.0310 | |
| 58497 | ENSG00000285738 | Novel transcript | -0.0310 | |
| 58496 | ENSG00000285737 | LINC02680 | long intergenic non-protein coding RNA 2680 | -0.0310 |
| 58495 | ENSG00000285736 | Novel transcript | -0.0310 | |
| 58494 | ENSG00000285735 | LINC02717 | long intergenic non-protein coding RNA 2717 | -0.0310 |
