SHOGoiN Cell Transcriptome: GSM1269244

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269244


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T242Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T48 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000148516 ZEB1 zinc finger E-box binding homeobox 1 166.1299
2 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 91.0689
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 78.3282
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 63.3799
5 ENSG00000135720 DYNC1LI2 dynein cytoplasmic 1 light intermediate chain 2 51.9159
6 ENSG00000168556 ING2 inhibitor of growth family member 2 40.6381
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 36.5154
8 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S rRNA 26.7537
9 ENSG00000157399 ARSL arylsulfatase L 25.7696
10 ENSG00000215114 UBXN2B UBX domain protein 2B 24.2535

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285744 novel transcript -0.0310
58502 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0310
58501 ENSG00000285742 novel transcript -0.0310
58500 ENSG00000285741 novel transcript -0.0310
58499 ENSG00000285740 novel transcript -0.0310
58498 ENSG00000285739 novel transcript, antisense to NRG3 -0.0310
58497 ENSG00000285738 Novel transcript -0.0310
58496 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0310
58495 ENSG00000285736 Novel transcript -0.0310
58494 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0310

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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