Human Omics database for
the Generation of iPS and Normal Cells
Release notes
Statistics
Document manuals
FAQ
All Modules
Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1269244
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1269244
Profile download
6000003010000000000000-738
Sequence Read Archive
SRP033135
SRP033135_T242
Pseudo-temporal ordering of individual cells reveals regulators of differentiation
Transcriptome
Myoblast_T48 (Skeletal muscle)
Human
Muscle
RNA-seq
HiSeq 2500
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000148516
ZEB1
zinc finger E-box binding homeobox 1
166.1299
2
ENSG00000198899
MT-ATP6
mitochondrially encoded ATP synthase membrane subunit 6
91.0689
3
ENSG00000251562
MALAT1
metastasis associated lung adenocarcinoma transcript 1
78.3282
4
ENSG00000210082
MT-RNR2
mitochondrially encoded 16S rRNA
63.3799
5
ENSG00000135720
DYNC1LI2
dynein cytoplasmic 1 light intermediate chain 2
51.9159
6
ENSG00000168556
ING2
inhibitor of growth family member 2
40.6381
7
ENSG00000198712
MT-CO2
mitochondrially encoded cytochrome c oxidase II
36.5154
8
ENSG00000211459
MT-RNR1
mitochondrially encoded 12S rRNA
26.7537
9
ENSG00000157399
ARSL
arylsulfatase L
25.7696
10
ENSG00000215114
UBXN2B
UBX domain protein 2B
24.2535
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285744
novel transcript
-0.0310
58502
ENSG00000285743
novel transcript, LINP1-LINC00707 readthrough
-0.0310
58501
ENSG00000285742
novel transcript
-0.0310
58500
ENSG00000285741
novel transcript
-0.0310
58499
ENSG00000285740
novel transcript
-0.0310
58498
ENSG00000285739
novel transcript, antisense to NRG3
-0.0310
58497
ENSG00000285738
Novel transcript
-0.0310
58496
ENSG00000285737
LINC02680
long intergenic non-protein coding RNA 2680
-0.0310
58495
ENSG00000285736
Novel transcript
-0.0310
58494
ENSG00000285735
LINC02717
long intergenic non-protein coding RNA 2717
-0.0310
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
download
Now loading...
