Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269257

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269257


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T254Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 116.1368
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 84.3526
3 ENSG00000115414 FN1 fibronectin 1 79.3662
4 ENSG00000182718 ANXA2 annexin A2 62.0536
5 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 48.1050
6 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 42.8306
7 ENSG00000075624 ACTB actin beta 32.1265
8 ENSG00000100316 RPL3 ribosomal protein L3 31.8650
9 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 31.4572
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 31.1824

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0832
58502 ENSG00000285733 novel protein -0.0832
58501 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0832
58500 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0832
58499 ENSG00000285730 novel transcript -0.0832
58498 ENSG00000285729 novel transcript -0.0832
58497 ENSG00000285727 novel transcript -0.0832
58496 ENSG00000285726 novel transcript -0.0832
58495 ENSG00000285725 novel transcript -0.0832
58494 ENSG00000285724 novel transcript -0.0832

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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