Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269260

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269260


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T257Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 134.4037
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 113.2334
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 82.6322
4 ENSG00000167552 TUBA1A tubulin alpha 1a 47.5336
5 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 38.1898
6 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 36.5193
7 ENSG00000159173 TNNI1 troponin I1, slow skeletal type 25.2160
8 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S rRNA 24.0274
9 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 23.8713
10 ENSG00000075624 ACTB actin beta 21.7190

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0800
58502 ENSG00000285736 Novel transcript -0.0800
58501 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0800
58500 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0800
58499 ENSG00000285733 novel protein -0.0800
58498 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0800
58497 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0800
58496 ENSG00000285729 novel transcript -0.0800
58495 ENSG00000285728 novel transcript, antisense to PPIH -0.0800
58494 ENSG00000285727 novel transcript -0.0800

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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