SHOGoiN Cell Transcriptome: GSM1269261

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269261


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T258Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 126.1843
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 111.1462
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 69.6064
4 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 47.1166
5 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 43.8449
6 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 39.1686
7 ENSG00000182718 ANXA2 annexin A2 37.0071
8 ENSG00000115414 FN1 fibronectin 1 31.5402
9 ENSG00000198938 MT-CO3 mitochondrially encoded cytochrome c oxidase III 30.9263
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 29.0591

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285730 novel transcript -0.0919
58502 ENSG00000285729 novel transcript -0.0919
58501 ENSG00000285727 novel transcript -0.0919
58500 ENSG00000285726 novel transcript -0.0919
58499 ENSG00000285725 novel transcript -0.0919
58498 ENSG00000285724 novel transcript -0.0919
58497 ENSG00000285723 novel protein -0.0919
58496 ENSG00000285722 novel transcript -0.0919
58494 ENSG00000285720 Putative protein FAM90A16P/FAM90A17P -0.0919
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 29.0591

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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