Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269262

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T259Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 130.3835
2 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 82.4717
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 80.1626
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 45.0855
5 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 32.9362
6 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 29.5419
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 28.9136
8 ENSG00000176887 SOX11 SRY-box transcription factor 11 27.8447
9 ENSG00000124491 F13A1 coagulation factor XIII A chain 26.7514
10 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 26.7187

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.1011
58502 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1011
58501 ENSG00000285733 novel protein -0.1011
58500 ENSG00000285732 novel transcript, antisense to ABCD2 -0.1011
58499 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.1011
58498 ENSG00000285730 novel transcript -0.1011
58497 ENSG00000285729 novel transcript -0.1011
58496 ENSG00000285728 novel transcript, antisense to PPIH -0.1011
58495 ENSG00000285727 novel transcript -0.1011
58494 ENSG00000285726 novel transcript -0.1011

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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