Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269262

Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project	Assay	Source Cell			Technology		Data
Expression Profile	SHOGoiN Cell Id	Project Name	Project Id	Assay Id	Project Title	Assay Type	Source Cell Type	Source Organism	Source Tissue Or Organ	Assay Technology	Assay Detection Instrumentation	Data Type
GSM1269262 Profile download	6000003010000000000000-738	Sequence Read Archive	SRP033135	SRP033135_T259	Pseudo-temporal ordering of individual cells reveals regulators of differentiation	Transcriptome	Myoblast_T72 (Skeletal muscle)	Human	Muscle	RNA-seq	HiSeq 2000	Sequence

Histogram (Expression count)

Top 10 up-regulated genes

Rank	ENSG	Gene symbol	Description	Z-score
1	ENSG00000210082	MT-RNR2	mitochondrially encoded 16S rRNA	130.3835
2	ENSG00000159251	ACTC1	actin alpha cardiac muscle 1	82.4717
3	ENSG00000251562	MALAT1	metastasis associated lung adenocarcinoma transcript 1	80.1626
4	ENSG00000198804	MT-CO1	mitochondrially encoded cytochrome c oxidase I	45.0855
5	ENSG00000198727	MT-CYB	mitochondrially encoded cytochrome b	32.9362
6	ENSG00000113140	SPARC	secreted protein acidic and cysteine rich	29.5419
7	ENSG00000198712	MT-CO2	mitochondrially encoded cytochrome c oxidase II	28.9136
8	ENSG00000176887	SOX11	SRY-box transcription factor 11	27.8447
9	ENSG00000124491	F13A1	coagulation factor XIII A chain	26.7514
10	ENSG00000156508	EEF1A1	eukaryotic translation elongation factor 1 alpha 1	26.7187

Bottom 10 down-regulated genes

Rank	ENSG	Gene symbol	Description	Z-score
58503	ENSG00000285735	LINC02717	long intergenic non-protein coding RNA 2717	-0.1011
58502	ENSG00000285734		novel transcript, antisense to CACNA1C	-0.1011
58501	ENSG00000285733		novel protein	-0.1011
58500	ENSG00000285732		novel transcript, antisense to ABCD2	-0.1011
58499	ENSG00000285731		Novel transcript, antisense to TBC1D5	-0.1011
58498	ENSG00000285730		novel transcript	-0.1011
58497	ENSG00000285729		novel transcript	-0.1011
58496	ENSG00000285728		novel transcript, antisense to PPIH	-0.1011
58495	ENSG00000285727		novel transcript	-0.1011
58494	ENSG00000285726		novel transcript	-0.1011

SOM(Self Organization Map)

Expression around clicked position: full download

Rank	ENSG	Gene symbol	Description	Z-score

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