SHOGoiN Cell Transcriptome: GSM1269266

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269266


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T262Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 113.6806
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 106.2214
3 ENSG00000115414 FN1 fibronectin 1 97.0257
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 44.3955
5 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 43.0994
6 ENSG00000182718 ANXA2 annexin A2 40.1646
7 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 38.3548
8 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 27.9364
9 ENSG00000075624 ACTB actin beta 27.1049
10 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 26.5424

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285730 novel transcript -0.0907
58502 ENSG00000285729 novel transcript -0.0907
58501 ENSG00000285728 novel transcript, antisense to PPIH -0.0907
58500 ENSG00000285727 novel transcript -0.0907
58499 ENSG00000285726 novel transcript -0.0907
58498 ENSG00000285725 novel transcript -0.0907
58497 ENSG00000285724 novel transcript -0.0907
58496 ENSG00000285723 novel protein -0.0907
58495 ENSG00000285722 novel transcript -0.0907
58494 ENSG00000285720 Putative protein FAM90A16P/FAM90A17P -0.0907

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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