SHOGoiN Cell Transcriptome: GSM1269268

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269268


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T264Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 124.9620
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 88.3741
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 69.7130
4 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 57.3366
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 48.2380
6 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 40.9405
7 ENSG00000133110 POSTN periostin 40.9173
8 ENSG00000164692 COL1A2 collagen type I alpha 2 chain 38.2735
9 ENSG00000075624 ACTB actin beta 34.9881
10 ENSG00000087086 FTL ferritin light chain 33.9290

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285733 novel protein -0.0847
58502 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0847
58501 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0847
58500 ENSG00000285730 novel transcript -0.0847
58499 ENSG00000285729 novel transcript -0.0847
58498 ENSG00000285728 novel transcript, antisense to PPIH -0.0847
58497 ENSG00000285727 novel transcript -0.0847
58496 ENSG00000285726 novel transcript -0.0847
58495 ENSG00000285725 novel transcript -0.0847
58494 ENSG00000285724 novel transcript -0.0847

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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