Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269271

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269271


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T267Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 143.7338
2 ENSG00000115414 FN1 fibronectin 1 61.5746
3 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 51.3047
4 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 41.0348
5 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 41.0348
6 ENSG00000107581 EIF3A eukaryotic translation initiation factor 3 subunit A 30.7649
7 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 30.7649
8 ENSG00000182718 ANXA2 annexin A2 30.7649
9 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 30.7649
10 ENSG00000087460 GNAS GNAS complex locus 20.4950

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285747 novel transcript -0.0448
58502 ENSG00000285746 putative UPF0607 protein ENSP00000383144 -0.0448
58501 ENSG00000285745 general transcription factor IIH subunit 5 (GTF2H5) pseudogene -0.0448
58500 ENSG00000285744 novel transcript -0.0448
58499 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0448
58498 ENSG00000285742 novel transcript -0.0448
58497 ENSG00000285741 novel transcript -0.0448
58496 ENSG00000285740 novel transcript -0.0448
58495 ENSG00000285739 novel transcript, antisense to NRG3 -0.0448
58494 ENSG00000285738 Novel transcript -0.0448

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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