Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269274

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269274


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T270Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 133.8439
2 ENSG00000075624 ACTB actin beta 79.2431
3 ENSG00000184009 ACTG1 actin gamma 1 49.6194
4 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 46.9074
5 ENSG00000182718 ANXA2 annexin A2 46.3780
6 ENSG00000133110 POSTN periostin 45.1233
7 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 44.3521
8 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 41.5616
9 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 38.9672
10 ENSG00000087086 FTL ferritin light chain 33.8306

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285739 novel transcript, antisense to NRG3 -0.0932
58502 ENSG00000285738 Novel transcript -0.0932
58501 ENSG00000285736 Novel transcript -0.0932
58500 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0932
58499 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0932
58498 ENSG00000285733 novel protein -0.0932
58497 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0932
58496 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0932
58495 ENSG00000285729 novel transcript -0.0932
58494 ENSG00000285728 novel transcript, antisense to PPIH -0.0932

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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