SHOGoiN Cell Transcriptome: GSM1269280
| Expression Profile | SHOGoiN Cell Id | Project Name | Project Id | Assay Id | Project | Assay | Source Cell | Technology | Data | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Project Title | Assay Type | Source Cell Type | Source Organism | Source Tissue Or Organ | Assay Technology | Assay Detection Instrumentation | Data Type | |||||
 GSM1269280 Profile download | 6000003010000000000000-738 | Sequence Read Archive | SRP033135 | SRP033135_T275 | Pseudo-temporal ordering of individual cells reveals regulators of differentiation | Transcriptome | Myoblast_T72 (Skeletal muscle) | Human | Muscle | RNA-seq | HiSeq 2000 | Sequence |
Histogram (Expression count)
Top 10 up-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 1 | ENSG00000210082 | MT-RNR2 | mitochondrially encoded 16S rRNA | 133.3252 |
| 2 | ENSG00000251562 | MALAT1 | metastasis associated lung adenocarcinoma transcript 1 | 87.8731 |
| 3 | ENSG00000115414 | FN1 | fibronectin 1 | 62.0956 |
| 4 | ENSG00000182718 | ANXA2 | annexin A2 | 55.4856 |
| 5 | ENSG00000198804 | MT-CO1 | mitochondrially encoded cytochrome c oxidase I | 54.6511 |
| 6 | ENSG00000156508 | EEF1A1 | eukaryotic translation elongation factor 1 alpha 1 | 40.6212 |
| 7 | ENSG00000198712 | MT-CO2 | mitochondrially encoded cytochrome c oxidase II | 34.3302 |
| 8 | ENSG00000102265 | TIMP1 | TIMP metallopeptidase inhibitor 1 | 32.7513 |
| 9 | ENSG00000091986 | CCDC80 | coiled-coil domain containing 80 | 32.1214 |
| 10 | ENSG00000087086 | FTL | ferritin light chain | 31.2051 |
Bottom 10 down-regulated genes
| Rank | ENSG | Gene symbol | Description | Z-score |
|---|---|---|---|---|
| 58503 | ENSG00000285738 | Novel transcript | -0.0862 | |
| 58502 | ENSG00000285737 | LINC02680 | long intergenic non-protein coding RNA 2680 | -0.0862 |
| 58501 | ENSG00000285736 | Novel transcript | -0.0862 | |
| 58500 | ENSG00000285735 | LINC02717 | long intergenic non-protein coding RNA 2717 | -0.0862 |
| 58499 | ENSG00000285734 | novel transcript, antisense to CACNA1C | -0.0862 | |
| 58498 | ENSG00000285733 | novel protein | -0.0862 | |
| 58497 | ENSG00000285732 | novel transcript, antisense to ABCD2 | -0.0862 | |
| 58496 | ENSG00000285731 | Novel transcript, antisense to TBC1D5 | -0.0862 | |
| 58495 | ENSG00000285730 | novel transcript | -0.0862 | |
| 58494 | ENSG00000285729 | novel transcript | -0.0862 |
