Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269286

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269286


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T280Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 105.1999
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 102.0395
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 54.4231
4 ENSG00000100234 TIMP3 TIMP metallopeptidase inhibitor 3 51.5650
5 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 44.3282
6 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 42.7709
7 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 40.6274
8 ENSG00000075624 ACTB actin beta 39.4914
9 ENSG00000115414 FN1 fibronectin 1 36.1570
10 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 32.5020

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285734 novel transcript, antisense to CACNA1C -0.1003
58502 ENSG00000285733 novel protein -0.1003
58501 ENSG00000285732 novel transcript, antisense to ABCD2 -0.1003
58500 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.1003
58499 ENSG00000285730 novel transcript -0.1003
58498 ENSG00000285729 novel transcript -0.1003
58497 ENSG00000285728 novel transcript, antisense to PPIH -0.1003
58496 ENSG00000285727 novel transcript -0.1003
58495 ENSG00000285726 novel transcript -0.1003
58494 ENSG00000285724 novel transcript -0.1003

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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