SHOGoiN Cell Transcriptome: GSM1269294

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269294


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T287Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 88.8658
2 ENSG00000115414 FN1 fibronectin 1 50.7581
3 ENSG00000100316 RPL3 ribosomal protein L3 38.0556
4 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 38.0556
5 ENSG00000139218 SCAF11 SR-related CTD associated factor 11 38.0556
6 ENSG00000182718 ANXA2 annexin A2 38.0556
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 38.0556
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 38.0556
9 ENSG00000211459 MT-RNR1 mitochondrially encoded 12S rRNA 38.0556
10 ENSG00000065357 DGKA diacylglycerol kinase alpha 25.3530

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285747 novel transcript -0.0521
58502 ENSG00000285746 putative UPF0607 protein ENSP00000383144 -0.0521
58501 ENSG00000285745 general transcription factor IIH subunit 5 (GTF2H5) pseudogene -0.0521
58500 ENSG00000285744 novel transcript -0.0521
58499 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0521
58498 ENSG00000285742 novel transcript -0.0521
58497 ENSG00000285741 novel transcript -0.0521
58496 ENSG00000285740 novel transcript -0.0521
58495 ENSG00000285739 novel transcript, antisense to NRG3 -0.0521
58494 ENSG00000285738 Novel transcript -0.0521

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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