SHOGoiN Cell Transcriptome: GSM1269297

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269297


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T290Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000115414 FN1 fibronectin 1 173.3859
2 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 70.5104
3 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 42.9972
4 ENSG00000120708 TGFBI transforming growth factor beta induced 39.4085
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 38.2123
6 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 37.0161
7 ENSG00000102265 TIMP1 TIMP metallopeptidase inhibitor 1 32.2311
8 ENSG00000133110 POSTN periostin 28.6425
9 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 26.2500
10 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 25.0538

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285747 novel transcript -0.0670
58502 ENSG00000285746 putative UPF0607 protein ENSP00000383144 -0.0670
58501 ENSG00000285745 general transcription factor IIH subunit 5 (GTF2H5) pseudogene -0.0670
58500 ENSG00000285744 novel transcript -0.0670
58499 ENSG00000285743 novel transcript, LINP1-LINC00707 readthrough -0.0670
58498 ENSG00000285742 novel transcript -0.0670
58497 ENSG00000285741 novel transcript -0.0670
58496 ENSG00000285740 novel transcript -0.0670
58495 ENSG00000285739 novel transcript, antisense to NRG3 -0.0670
58494 ENSG00000285738 Novel transcript -0.0670

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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