Human Omics database for
the Generation of iPS and Normal Cells

SHOGoiN Cell Transcriptome: GSM1269305

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269305


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T295Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 122.6298
2 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 78.1716
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 70.9651
4 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 47.3935
5 ENSG00000137801 THBS1 thrombospondin 1 45.5356
6 ENSG00000075624 ACTB actin beta 39.1347
7 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 37.0301
8 ENSG00000182718 ANXA2 annexin A2 36.6164
9 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 33.3071
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 30.8396

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285742 novel transcript -0.0910
58502 ENSG00000285741 novel transcript -0.0910
58501 ENSG00000285740 novel transcript -0.0910
58500 ENSG00000285739 novel transcript, antisense to NRG3 -0.0910
58499 ENSG00000285738 Novel transcript -0.0910
58498 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0910
58497 ENSG00000285736 Novel transcript -0.0910
58496 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0910
58495 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0910
58494 ENSG00000285733 novel protein -0.0910

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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