SHOGoiN Cell Transcriptome: GSM1269308

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269308


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T297Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 135.5564
2 ENSG00000115414 FN1 fibronectin 1 85.1739
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 73.8163
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 65.3779
5 ENSG00000182718 ANXA2 annexin A2 38.6798
6 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 36.3397
7 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 32.8769
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 29.3668
9 ENSG00000184009 ACTG1 actin gamma 1 29.2958
10 ENSG00000075624 ACTB actin beta 28.3740

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0851
58502 ENSG00000285736 Novel transcript -0.0851
58501 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0851
58500 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0851
58499 ENSG00000285733 novel protein -0.0851
58498 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0851
58497 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0851
58496 ENSG00000285730 novel transcript -0.0851
58495 ENSG00000285729 novel transcript -0.0851
58494 ENSG00000285727 novel transcript -0.0851

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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