SHOGoiN Cell Transcriptome: GSM1269311

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269311


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T299Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 148.0991
2 ENSG00000155657 TTN titin 79.5187
3 ENSG00000167552 TUBA1A tubulin alpha 1a 71.0730
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 70.5094
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 55.7358
6 ENSG00000168530 MYL1 myosin light chain 1 42.8974
7 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 35.4961
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 29.1598
9 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 27.5436
10 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 27.3156

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285742 novel transcript -0.0685
58502 ENSG00000285741 novel transcript -0.0685
58501 ENSG00000285740 novel transcript -0.0685
58500 ENSG00000285739 novel transcript, antisense to NRG3 -0.0685
58499 ENSG00000285738 Novel transcript -0.0685
58498 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0685
58497 ENSG00000285736 Novel transcript -0.0685
58496 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0685
58495 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0685
58494 ENSG00000285733 novel protein -0.0685

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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