SHOGoiN Cell Transcriptome: GSM1269319

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269319


Profile download
6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T305Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S rRNA 122.5500
2 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 59.6316
3 ENSG00000251562 MALAT1 metastasis associated lung adenocarcinoma transcript 1 55.4299
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 53.5662
5 ENSG00000115414 FN1 fibronectin 1 49.8341
6 ENSG00000184009 ACTG1 actin gamma 1 47.0701
7 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 45.0177
8 ENSG00000075624 ACTB actin beta 44.4271
9 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 38.2118
10 ENSG00000198712 MT-CO2 mitochondrially encoded cytochrome c oxidase II 33.8020

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285742 novel transcript -0.0921
58502 ENSG00000285741 novel transcript -0.0921
58501 ENSG00000285740 novel transcript -0.0921
58500 ENSG00000285739 novel transcript, antisense to NRG3 -0.0921
58499 ENSG00000285738 Novel transcript -0.0921
58498 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0921
58497 ENSG00000285736 Novel transcript -0.0921
58496 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0921
58495 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0921
58494 ENSG00000285733 novel protein -0.0921

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...