SHOGoiN Cell Transcriptome: GSM1269320

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1269320


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6000003010000000000000-738Sequence Read ArchiveSRP033135SRP033135_T306Pseudo-temporal ordering of individual cells reveals regulators of differentiationTranscriptomeMyoblast_T72 (Skeletal muscle)HumanMuscleRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000159251 ACTC1 actin alpha cardiac muscle 1 172.6905
2 ENSG00000107796 ACTA2 actin alpha 2, smooth muscle 90.2027
3 ENSG00000167552 TUBA1A tubulin alpha 1a 66.9922
4 ENSG00000180139 ACTA2-AS1 ACTA2 antisense RNA 1 53.7723
5 ENSG00000075624 ACTB actin beta 45.5767
6 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 28.2930
7 ENSG00000182718 ANXA2 annexin A2 22.4344
8 ENSG00000111640 GAPDH glyceraldehyde-3-phosphate dehydrogenase 20.5843
9 ENSG00000113140 SPARC secreted protein acidic and cysteine rich 20.3182
10 ENSG00000155657 TTN titin 19.1043

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58503 ENSG00000285737 LINC02680 long intergenic non-protein coding RNA 2680 -0.0619
58502 ENSG00000285736 Novel transcript -0.0619
58501 ENSG00000285735 LINC02717 long intergenic non-protein coding RNA 2717 -0.0619
58500 ENSG00000285734 novel transcript, antisense to CACNA1C -0.0619
58499 ENSG00000285733 novel protein -0.0619
58498 ENSG00000285732 novel transcript, antisense to ABCD2 -0.0619
58497 ENSG00000285731 Novel transcript, antisense to TBC1D5 -0.0619
58496 ENSG00000285730 novel transcript -0.0619
58495 ENSG00000285729 novel transcript -0.0619
58494 ENSG00000285728 novel transcript, antisense to PPIH -0.0619

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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