Human Omics database for
the Generation of iPS and Normal Cells
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Cell Taxonomy(Human cell)
Cell Taxonomy(C. Elegans cell)
Cell Taxonomy(Sea Urchin cell)
Transcriptome Sample(Single-cell)
Transcriptome Project(Single-cell)
Methylome Sample(Single-cell)
Methylome Project(Single-cell)
Cell Conversion(Differentiation)
Cell Conversion(Transdifferentiation)
Cell Marker(from literature)
Cell Image
Tissue Image
SHOGoiN Cell Transcriptome: GSM1269324
Expression Profile
SHOGoiN Cell Id
Project Name
Project Id
Assay Id
Project
Assay
Source Cell
Technology
Data
Project Title
Assay Type
Source Cell Type
Source Organism
Source Tissue Or Organ
Assay Technology
Assay Detection Instrumentation
Data Type
GSM1269324
Profile download
6000003010000000000000-738
Sequence Read Archive
SRP033135
SRP033135_T310
Pseudo-temporal ordering of individual cells reveals regulators of differentiation
Transcriptome
Myoblast_T72 (Skeletal muscle)
Human
Muscle
RNA-seq
HiSeq 2000
Sequence
Histogram (Expression count)
Top 10 up-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
1
ENSG00000159251
ACTC1
actin alpha cardiac muscle 1
142.3640
2
ENSG00000075624
ACTB
actin beta
73.9526
3
ENSG00000150347
ARID5B
AT-rich interaction domain 5B
36.2864
4
ENSG00000167552
TUBA1A
tubulin alpha 1a
35.2016
5
ENSG00000023734
STRAP
serine/threonine kinase receptor associated protein
30.3397
6
ENSG00000156508
EEF1A1
eukaryotic translation elongation factor 1 alpha 1
27.9427
7
ENSG00000177565
TBL1XR1
transducin beta like 1 X-linked receptor 1
27.0735
8
ENSG00000055208
TAB2
TGF-beta activated kinase 1 (MAP3K7) binding protein 2
26.6627
9
ENSG00000182718
ANXA2
annexin A2
26.5540
10
ENSG00000277443
MARCKS
myristoylated alanine rich protein kinase C substrate
23.4339
Bottom 10 down-regulated genes
Rank
ENSG
Gene symbol
Description
Z-score
58503
ENSG00000285746
putative UPF0607 protein ENSP00000383144
-0.0677
58502
ENSG00000285745
general transcription factor IIH subunit 5 (GTF2H5) pseudogene
-0.0677
58501
ENSG00000285744
novel transcript
-0.0677
58500
ENSG00000285743
novel transcript, LINP1-LINC00707 readthrough
-0.0677
58499
ENSG00000285742
novel transcript
-0.0677
58498
ENSG00000285741
novel transcript
-0.0677
58497
ENSG00000285740
novel transcript
-0.0677
58496
ENSG00000285739
novel transcript, antisense to NRG3
-0.0677
58495
ENSG00000285738
Novel transcript
-0.0677
58494
ENSG00000285737
LINC02680
long intergenic non-protein coding RNA 2680
-0.0677
SOM(Self Organization Map)
Expression around clicked position:
full
download
Rank
ENSG
Gene symbol
Description
Z-score
full
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